Hiding /theme Folder in Source

[shawn_a]

My point is the theme is hardcoded to the theme subdirectory.
They all are.

Its not really a php or function issue. You have to change it manually or via output buffering like i said.

Ideally and Perhaps you could change the theme folder definition in core but I have no idea if that will work, and there is no guarantee that a theme even sues that for the path.